Molecular Evolution of Human Coronavirus Genomes
Identifieur interne : 000F76 ( Main/Exploration ); précédent : 000F75; suivant : 000F77Molecular Evolution of Human Coronavirus Genomes
Auteurs : Diego Forni [Italie] ; Rachele Cagliani [Italie] ; Mario Clerici [Italie] ; Manuela Sironi [Italie]Source :
- Trends in Microbiology [ 0966-842X ] ; 2016.
Descripteurs français
- KwdFr :
- Coronavirus du syndrome respiratoire du Moyen-Orient (génétique), Génome viral (génétique), Humains, Hémagglutinines virales (génétique), Hémagglutinines virales (métabolisme), Phosphodiesterases (génétique), Phosphodiesterases (métabolisme), Protéines de fusion virale (génétique), Protéines de fusion virale (métabolisme), Protéines virales régulatrices ou accessoires (génétique), Protéines virales régulatrices ou accessoires (métabolisme), Spécificité d'hôte (génétique), Virus du SRAS (génétique), Évolution moléculaire.
- MESH :
- génétique : Coronavirus du syndrome respiratoire du Moyen-Orient, Génome viral, Hémagglutinines virales, Phosphodiesterases, Protéines de fusion virale, Protéines virales régulatrices ou accessoires, Spécificité d'hôte, Virus du SRAS.
- métabolisme : Hémagglutinines virales, Phosphodiesterases, Protéines de fusion virale, Protéines virales régulatrices ou accessoires.
- Humains, Évolution moléculaire.
English descriptors
- KwdEn :
- Evolution, Molecular, Genome, Viral (genetics), Hemagglutinins, Viral (genetics), Hemagglutinins, Viral (metabolism), Host Specificity (genetics), Humans, Middle East Respiratory Syndrome Coronavirus (genetics), Phosphoric Diester Hydrolases (genetics), Phosphoric Diester Hydrolases (metabolism), SARS Virus (genetics), Viral Fusion Proteins (genetics), Viral Fusion Proteins (metabolism), Viral Regulatory and Accessory Proteins (genetics), Viral Regulatory and Accessory Proteins (metabolism).
- MESH :
- chemical , genetics : Hemagglutinins, Viral, Phosphoric Diester Hydrolases, Viral Fusion Proteins, Viral Regulatory and Accessory Proteins.
- genetics : Genome, Viral, Host Specificity, Middle East Respiratory Syndrome Coronavirus, SARS Virus.
- chemical , metabolism : Hemagglutinins, Viral, Phosphoric Diester Hydrolases, Viral Fusion Proteins, Viral Regulatory and Accessory Proteins.
- Evolution, Molecular, Humans.
Abstract
Human coronaviruses (HCoVs), including SARS-CoV and MERS-CoV, are zoonotic pathogens that originated in wild animals. HCoVs have large genomes that encode a fixed array of structural and nonstructural components, as well as a variety of accessory proteins that differ in number and sequence even among closely related CoVs. Thus, in addition to recombination and mutation, HCoV genomes evolve through gene gains and losses. In this review we summarize recent findings on the molecular evolution of HCoV genomes, with special attention to recombination and adaptive events that generated new viral species and contributed to host shifts and to HCoV emergence.
Url:
DOI: 10.1016/j.tim.2016.09.001
PubMed: 27743750
PubMed Central: 7111218
Affiliations:
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MEDEA, Bioinformatics, Bosisio Parini, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Scientific Institute IRCCS E. MEDEA, Bioinformatics, Bosisio Parini</wicri:regionArea><wicri:noRegion>Bosisio Parini</wicri:noRegion></affiliation></author><author><name sortKey="Cagliani, Rachele" sort="Cagliani, Rachele" uniqKey="Cagliani R" first="Rachele" last="Cagliani">Rachele Cagliani</name><affiliation wicri:level="1"><nlm:aff id="aff0005">Scientific Institute IRCCS E. MEDEA, Bioinformatics, Bosisio Parini, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Scientific Institute IRCCS E. 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HCoVs have large genomes that encode a fixed array of structural and nonstructural components, as well as a variety of accessory proteins that differ in number and sequence even among closely related CoVs. Thus, in addition to recombination and mutation, HCoV genomes evolve through gene gains and losses. In this review we summarize recent findings on the molecular evolution of HCoV genomes, with special attention to recombination and adaptive events that generated new viral species and contributed to host shifts and to HCoV emergence.</p></sec><sec><title>Video Abstract</title><p><supplementary-material content-type="local-data" id="mmc1"><media xlink:href="mmc1.flv"></media></supplementary-material></p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Graham, R L" uniqKey="Graham R">R.L. Graham</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lau, S K" uniqKey="Lau S">S.K. 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Krogh</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Italie</li></country><region><li>Lombardie</li></region><settlement><li>Milan</li></settlement></list><tree><country name="Italie"><noRegion><name sortKey="Forni, Diego" sort="Forni, Diego" uniqKey="Forni D" first="Diego" last="Forni">Diego Forni</name></noRegion><name sortKey="Cagliani, Rachele" sort="Cagliani, Rachele" uniqKey="Cagliani R" first="Rachele" last="Cagliani">Rachele Cagliani</name><name sortKey="Clerici, Mario" sort="Clerici, Mario" uniqKey="Clerici M" first="Mario" last="Clerici">Mario Clerici</name><name sortKey="Clerici, Mario" sort="Clerici, Mario" uniqKey="Clerici M" first="Mario" last="Clerici">Mario Clerici</name><name sortKey="Sironi, Manuela" sort="Sironi, Manuela" uniqKey="Sironi M" first="Manuela" last="Sironi">Manuela Sironi</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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